Release notes

Recently published apps

We have just published the following GATK 4.4.0.0 tools:

  • GATK IndexFeatureFile used for indexing of provided feature files.

  • GATK MergeVcfs - used for combining multiple variant files.

  • GATK VariantEval BETA - used for evaluating variant calls.

  • GATK FilterMutectCalls - used to filter somatic SNVs and indels called by Mutect2.

We have also published Minimac 4 4.1.2, which is a tool for imputing genotypes.

Divya Sain