Personal Genome Project UK (PGP-UK) pilot dataset
The Personal Genome Project UK (PGP-UK) pilot dataset includes in-depth multi-omics profiling of thirteen participants, who have been profiled using whole genome sequencing (WGS) of DNA from whole blood, whole genome bisulphite sequencing (WGBS) of DNA methylation from whole blood (WGBS), deep and shallow sequencing of RNA from whole blood using RNA-seq and DNA methylation array profiling of both whole blood and saliva using the HumanMethylation450 BeadChip from Illumina.
The PGP-UK pilot dataset is now available on the CGC under the Public projects tab at the top navigation bar. You can search through the dataset containing 201 files, including fastq, bam, vcf and idat files by metadata, file extensions and tags. For instance, by choosing a specific subgroup of the participants, such as a given age group, you can now copy all data relating to that subgroup into your own project and analyze it using the tools available in the public apps gallery on the CGC.